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A circular order on edge-coloured trees and RNA m-diagrams

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journal contribution
posted on 2015-03-09, 10:16 authored by Robert J. Marsh, Sibylle Schroll
We study a circular order on labelled, m-edge-coloured trees with k vertices, and show that the set of such trees with a fixed circular order is in bijection with the set of RNA m-diagrams of degree k, combinatorial objects which can be regarded as RNA secondary structures of a certain kind. We enumerate these sets and show that the set of trees with a fixed circular order can be characterized as an equivalence class for the transitive closure of an operation which, in the case m=3, arises as an induction in the context of interval exchange transformations. © 2013 Elsevier Inc.

Funding

This work was supported by the Engineering and Physical Sciences Research Council [grant number EP/G007497/1], the Mathematical Sciences Research Institute (MSRI) in Berkeley, California, and by the Leverhulme Trust in the form of an Early Career Fellowship for Sibylle Schroll

History

Citation

Advances in Applied Mathematics, 2014, 54 (1), pp. 11-26

Author affiliation

/Organisation/COLLEGE OF SCIENCE AND ENGINEERING/Department of Mathematics

Version

  • AM (Accepted Manuscript)

Published in

Advances in Applied Mathematics

Publisher

Elsevier for Academic Press

issn

0196-8858

eissn

1090-2074

Copyright date

2014

Available date

2015-12-14

Publisher version

http://www.sciencedirect.com/science/article/pii/S0196885813001255

Notes

2010 Mathematics Subject Classification: Primary: 05C05, 05A15; Secondary: 37B10

Language

en

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