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CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis.

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journal contribution
posted on 2016-11-16, 11:02 authored by Simon P. Skinner, Rasmus H. Fogh, W. Boucher, Timothy J. Ragan, Luca G. Mureddu, Geerten W. Vuister
NMR spectroscopy is an indispensably powerful technique for the analysis of biomolecules under ambient conditions, both for structural- and functional studies. However, in practice the complexity of the technique has often frustrated its application by non-specialists. In this paper, we present CcpNmr version-3, the latest software release from the Collaborative Computational Project for NMR, for all aspects of NMR data analysis, including liquid- and solid-state NMR data. This software has been designed to be simple, functional and flexible, and aims to ensure that routine tasks can be performed in a straightforward manner. We have designed the software according to modern software engineering principles and leveraged the capabilities of modern graphics libraries to simplify a variety of data analysis tasks. We describe the process of backbone assignment as an example of the flexibility and simplicity of implementing workflows, as well as the toolkit used to create the necessary graphics for this workflow. The package can be downloaded from www.ccpn.ac.uk/v3-software/downloads and is freely available to all non-profit organisations.

Funding

This work was support by the MRC grant MR/L000555/1 awarded to GWV.

History

Citation

Journal of Biomolecular NMR (2016) 66: 111.

Author affiliation

/Organisation/COLLEGE OF MEDICINE, BIOLOGICAL SCIENCES AND PSYCHOLOGY/MBSP Non-Medical Departments/Molecular & Cell Biology

Version

  • VoR (Version of Record)

Published in

Journal of Biomolecular NMR (2016) 66: 111.

Publisher

Springer Verlag (Germany)

issn

0925-2738

eissn

1573-5001

Acceptance date

2016-09-07

Copyright date

2016

Available date

2016-11-16

Publisher version

http://link.springer.com/article/10.1007/s10858-016-0060-y

Language

en

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