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Clinical prediction models for mortality in patients with covid-19: external validation and individual participant data meta-analysis

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posted on 2024-10-01, 10:53 authored by Valentijn MT de Jong, Rebecca Z Rousset, Neftali Eduardo Antonio-Villa, Arnoldus G Buenen, Ben Van Calster, Omar Yaxmehen Bello-Chavolla, Nigel J Brunskill, Vasa Curcin, Johanna AA Damen, Carlos A Fermin-Martinez, Luisa Fernandez-Chirino, Davide Ferrari, Robert C Free, Rishi K Gupta, Pranabashis Haldar, Pontus Hedberg, Steven Kwasi Korang, Steef Kurstjens, Ron Kusters, Rupert W Major, Lauren Maxwell, Rajeshwari Nair, Pontus Naucler, Tri-Long Nguyen, Mahdad Noursadeghi, Rossana Rosa, Felipe Soares, Toshihiko Takada, Florien S van Royen, Maarten van Smeden, Laure Wynants, Martin Modrak, Folkert W Asselbergs, Marijke Linschoten, Karel GM Moons, Thomas PA Debray

Objective: To externally validate various prognostic models and scoring rules for predicting short term mortality in patients admitted to hospital for covid-19. 


Design: Two stage individual participant data meta-analysis. 


Setting: Secondary and tertiary care. 


Participants: 46 914 patients across 18 countries, admitted to a hospital with polymerase chain reaction confirmed covid-19 from November 2019 to April 2021. 


Data sources: Multiple (clustered) cohorts in Brazil, Belgium, China, Czech Republic, Egypt, France, Iran, Israel, Italy, Mexico, Netherlands, Portugal, Russia, Saudi Arabia, Spain, Sweden, United Kingdom, and United States previously identified by a living systematic review of covid-19 prediction models published in The BMJ, and through PROSPERO, reference checking, and expert knowledge. 


Model selection and eligibility criteria: Prognostic models identified by the living systematic review and through contacting experts. A priori models were excluded that had a high risk of bias in the participant domain of PROBAST (prediction model study risk of bias assessment tool) or for which the applicability was deemed poor. 


Methods: Eight prognostic models with diverse predictors were identified and validated. A two stage individual participant data meta-analysis was performed of the estimated model concordance (C) statistic, calibration slope, calibration-in-the-large, and observed to expected ratio (O:E) across the included clusters. 


Main outcome measures: 30 day mortality or in-hospital mortality. 


Results: Datasets included 27 clusters from 18 different countries and contained data on 46 914patients. The pooled estimates ranged from 0.67 to 0.80 (C statistic), 0.22 to 1.22 (calibration slope), and 0.18 to 2.59 (O:E ratio) and were prone to substantial between study heterogeneity. The 4C Mortality Score by Knight et al (pooled C statistic 0.80, 95% confidence interval 0.75 to 0.84, 95% prediction interval 0.72 to 0.86) and clinical model by Wang et al (0.77, 0.73 to 0.80, 0.63 to 0.87) had the highest discriminative ability. On average, 29% fewer deaths were observed than predicted by the 4C Mortality Score (pooled O:E 0.71, 95% confidence interval 0.45 to 1.11, 95% prediction interval 0.21 to 2.39), 35% fewer than predicted by the Wang clinical model (0.65, 0.52 to 0.82, 0.23 to 1.89), and 4% fewer than predicted by Xie et al's model (0.96, 0.59 to 1.55, 0.21 to 4.28). 


Conclusion: The prognostic value of the included models varied greatly between the data sources. Although the Knight 4C Mortality Score and Wang clinical model appeared most promising, recalibration (intercept and slope updates) is needed before implementation in routine care.

Funding

Integrated human data repositories for infectious disease-related international cohorts to foster personalized medicine approaches to infectious disease research

European Commission

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National Institute for Health and Care Research (NIHR) Leicester Biomedical Research Centre

Human Immune Response Variation in Tuberulosis

Wellcome Trust

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Czech National Infrastructure for Biological Data

Ministry of Education Youth and Sports

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Dutch Heart Foundation (2020B006 CAPACITY)

ZonMw (DEFENCE 10430102110006)

EuroQol Research Foundation

Novartis Global

Sanofi Genzyme Europe

Novo Nordisk Nederland

Servier Nederland

Daiichi Sankyo Nederland

University Medical Centre Utrecht

CardioVasculair Onderzoek Nederland 2015-12 eDETECT

NIHR University College London Hospital Biomedical Research Centre

Internal Funds KU Leuven (C24M/20/064)

History

Citation

de Jong V M T, Rousset R Z, Antonio-Villa N E, Buenen A G, Van Calster B, Bello-Chavolla O Y et al. Clinical prediction models for mortality in patients with covid-19: external validation and individual participant data meta-analysis BMJ 2022; 378 :e069881 doi:10.1136/bmj-2021-069881

Author affiliation

Department of Cardiovascular Sciences, University of Leicester

Version

  • VoR (Version of Record)

Published in

BMJ-BRITISH MEDICAL JOURNAL

Volume

378

Pagination

(11)

Publisher

BMJ PUBLISHING GROUP

issn

0959-535X

eissn

1756-1833

Acceptance date

2022-05-25

Copyright date

2022

Available date

2024-10-01

Spatial coverage

England

Language

English

Data Access Statement

The data from Tongji Hospital, China that support the findings of this study are available from https://github.com/HAIRLAB/Pre_Surv_COVID_19. Data collected within CAPACITY-COVID is available on reasonable request (see https://capacity-covid.eu/for-professionals/). Data for the CovidRetro study are available on request from MM or the secretariat of the Institute of Microbiology of the Czech Academy of Sciences (contact via mbu@biomed.cas.cz) for researchers who meet the criteria for access to confidential data. The data are not publicly available owing to privacy restrictions imposed by the ethical committee of General University Hospital in Prague and the GDPR regulation of the European Union. We can arrange to run any analytical code locally and share the results, provided the code and the results do not reveal personal information. The remaining data that support the findings of this study are not publicly available.

Rights Retention Statement

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