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Integrating an attention-based deep learning framework and the SAFY-V model for winter wheat yield estimation using time series SAR and optical data

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journal contribution
posted on 2022-10-10, 13:25 authored by D Han, P Wang, Kevin Tansey, J Liu, Y Zhang, H Tian, S Zhang

Information on the spatial distribution of yields can be obtained over a large area by using remote sensing (RS) data. Combining Synthetic Aperture Radar (SAR), being sensitive to above ground biomass and soil moisture in all weather conditions, and optical data can improve the usability of RS data and provide a basis for pixel-based crop yield estimation (YE). In this study, an Upscaled Convolutional Gated Recurrent Unit model incorporated an attention mechanism (UpSc-AConvGRU model) was proposed to improve the estimation accuracy of the winter wheat growth parameter, Leaf Area Index (LAI). Gap filling the time series of optical data was done with backscatter coefficients, local incidence angles and polarimetric decomposition information from Sentinel-1 SAR imagery. The time series LAI estimated by the UpSc-AConvGRU model and Vegetation Temperature Condition Index (VTCI) retrieved from Sentinel-3 optical imagery were then used as state variables of the SAFY-V model to estimate winter wheat yield. The results showed that the proposed UpSc-AConvGRU model incorporated the Convolutional Block Attention Module (CBAM) can effectively improve the accuracy of LAI estimation, with RMSEs ranging from 0.413 to 0.699 m2 m2 for LAI estimated within main growth stages (MGSs) of winter wheat. The correlation between estimated LAI and Sentinel-3 retrieved LAI was generally higher at irrigated farmland compared to rain-fed farmland. The estimated LAI was closest to Sentinel-3 retrieved LAI at the green-up and late heading-filling stage of winter wheat, followed by the jointing and early heading-filling stage, and finally the milk maturity stage. There was good agreement between the SAFY-V model estimated and field measured winter wheat yields (R2 = 0.546, RMSE = 0.757 t ha−1), and the estimated yields at the pixel scale in the Guanzhong Plain, PR China were satisfactory. This study combined deep learning and crop growth modeling, proposed a new pixel scale winter wheat YE method.

Funding

National Natural Science Foundation of China under Grants 42171332 and 41871336

UK Research and Innovation (UKRI) funding from a Science & Technology Facilities Council grant administered through Rothamsted Research (No. SM008 CAU)

Royal Society-Newton Mobility Grant (UK)

China Scholarship Council (No. 202106350084) and the Chinese Universities Scientific Fund (No. 2022TC161)

History

Author affiliation

School of Geography, Geology and the Environment, University of Leicester

Version

  • AM (Accepted Manuscript)

Published in

Computers and Electronics in Agriculture

Volume

201

Pagination

107334 - 107334

Publisher

Elsevier BV

issn

0168-1699

Copyright date

2022

Available date

2023-08-28

Language

en

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