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Stochastic noise and synchronisation during dictyostelium aggregation make cAMP oscillations robust.

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posted on 2012-10-24, 08:55 authored by Jongrae Kim, Pat Heslop-Harrison, Ian Postlethwaite, Declan G. Bates
Stable and robust oscillations in the concentration of adenosine 3', 5'-cyclic monophosphate (cAMP) are observed during the aggregation phase of starvation-induced development in Dictyostelium discoideum. In this paper we use mathematical modelling together with ideas from robust control theory to identify two factors which appear to make crucial contributions to ensuring the robustness of these oscillations. Firstly, we show that stochastic fluctuations in the molecular interactions play an important role in preserving stable oscillations in the face of variations in the kinetics of the intracellular network. Secondly, we show that synchronisation of the aggregating cells through the diffusion of extracellular cAMP is a key factor in ensuring robustness of the oscillatory waves of cAMP observed in Dictyostelium cell cultures to cell-to-cell variations. A striking and quite general implication of the results is that the robustness analysis of models of oscillating biomolecular networks (circadian clocks, Ca(2+) oscillations, etc.) can only be done reliably by using stochastic simulations, even in the case where molecular concentrations are very high. Stable and robust oscillations in the concentration of adenosine 3′, 5′-cyclic monophosphate (cAMP) are observed during the aggregation phase of starvation-induced development in Dictyostelium discoideum. In this paper we use mathematical modelling together with ideas from robust control theory to identify two factors which appear to make crucial contributions to ensuring the robustness of these oscillations. Firstly, we show that stochastic fluctuations in the molecular interactions play an important role in preserving stable oscillations in the face of variations in the kinetics of the intracellular network. Secondly, we show that synchronisation of the aggregating cells through the diffusion of extracellular cAMP is a key factor in ensuring robustness of the oscillatory waves of cAMP observed in Dictyostelium cell cultures to cell-to-cell variations. A striking and quite general implication of the results is that the robustness analysis of models of oscillating biomolecular networks (circadian clocks, Ca2+ oscillations, etc.) can only be done reliably by using stochastic simulations, even in the case where molecular concentrations are very high.

Funding

BBSRC research grant BB/D015340/1.

History

Citation

PLoS Computational Biology, 2007, 3 (11), pp. e218-e218

Published in

PLoS Computational Biology

Publisher

Public Library of Science for International Society for Computational Biology (ISCB)

issn

1553-734X

eissn

1553-7358

Copyright date

2007

Available date

2012-10-24

Publisher version

http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.0030218

Language

eng

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